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### In which category is your new term request?
- [ ] new_definition
- [X] existing_definition
### Preferred term label
chromosome
### Synonyms
_No response_
### Synonym type
None
### Textual …
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Hi!!
I'm curated a genome with PretextView. I organized the map and tagged some unlocs with the M option and finally tagged the chromosomes with S mode. When I export the map to agp, a map.pretext.…
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### In which category is your new term request?
- [ ] new_definition
- [X] existing_definition
### Preferred term label
chromosome
### Synonyms
N/A
### Textual definition
a part of the karyotyp…
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Hi there, can monopogen handle chromosome X, especially in males? Is there a standard of practice? Thanks! -Xiaolin
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Hi,
Thanks for your nice tool.
I can see all 13 chromosomes in juicebox. After running PlotHicGenome with the following command line; only 12 chromosomes were displayed in the plot.
My command…
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Hello,
I'm trying to run a script using HTSeq- count. I tried to use **--add-chromosome-info** as I need to have the chromosomal coordinate in my output file. Here is the script that I used:
**m…
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I am plotting runs of homozygosity and am using plot_StackedRuns. Is there any way to get 1 plot with all chromosomes instead of separate plots for each chromosome?
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Thank you very much for creating amazing resources!
Quick question: do you plan to release phased chromosome X any time soon?
Thanks again!
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Hello,
With Verkko 2.2, we get T2T length sequences for nearly all the chromosomes for our sample. However, we noticed that for chromosome 9, the assembly phasing was actually worse. Previously usi…
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chromosomes 1-3 have a difefrent block structure I think and thus break the code:
```
File "/mnt/c/development/varvis-download/development/bamnostic/extract_bam_subset.py", line 111, in
e…