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Stand up a server with the RNA recompute data.
s3://cgl-rnaseq-recompute-fixed
Assemble metadata preparation for tcga and GTEX
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I noticed that no new commit has been made since March, 2017. I would like to know what is the status of this project and if there are future plans that can be shared with the community. Also, I would…
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While ga4gh/schema was [updated](https://github.com/ga4gh/schemas/commit/e87bfc256ab54bc6ee3ebccb0d82a5b145aa1889#diff-5ffc45f746567e5fb402c64aee39c443) to support our schemas the ga4gh/server is [~ 1…
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Depends on the client and pysam.
https://github.com/ga4gh/ga4gh-server/pull/1610
Related https://github.com/ga4gh/ga4gh-server/issues/707
https://github.com/ga4gh/ga4gh-server/issues/706
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https://github.com/ga4gh/vrs-python/blob/main/src/ga4gh/vrs/dataproxy.py (always a tell when the code references "VR" and not "VRS")
Most of this is copy-pasted from SeqRepo. This seems less than i…
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Add links in documentation to other `ga4gh` API related software and how they can be used in relation to this software. Please just comment with links of software that is part of the ga4gh API ecosyst…
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I am trying to deploy and test GA4GH server at a fresh installation of Ubuntu 16.04. I did everything in [Deployment on Apache](http://ga4gh-reference-implementation.readthedocs.io/en/latest/installat…
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I am trying to install the newest version of `ga4gh-server` package (0.3.6) via `pip`. After installation the server throws an error:
```
[Mon Mar 20 15:12:58.112647 2017] [wsgi:error] [pid 25664:…
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I am trying to access the GA4GH-based BRCA server endpoint (http://brcaexchange.org/backend/data/ga4gh/v0.6.0a7/). It seems to be not available anymore. Did the server URL changed?
The URL in [iPyt…
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I am getting 502 errors now from the reference server at https://htsget.ga4gh.org/. This just started happening sometime on Dec 28, causing igv.js htsget unit tests to fail. Example in screenshot…