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I have idat files for a EPIC array reference dataset from purified blood samples. I generated an RGsetReference from the reference idats and I obtained the RGset object from the idats of the dataset o…
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https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/dotwhisker-00check.html
using R Under development (unstable) (2024-09-01 r87083)
using platform: x86_64-pc-linux-gnu
R was …
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When I run preprocess code
```
python generate_data.py --data_dir ../dataset/hoi4d --save_dir ../output --inpaint
```
I get this error when I run for "ZY20210800001_H1_C2_N15_S93_s02_T2_frame008…
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Hello, thank you for making such a good tool. First, I looked it up, but... I'm sorry to ask you this question because I can't find a way.
I used idat files in **pre_process using the script and re…
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Hi, I tried out lumidat on a large number of IDAT files (~200) and I get truncation errors. I believe this might be because the resulting java call will be extremely long.
- I get ~27 samples in the …
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I have a dataset that I am trying to convert to gtc but ran in to an error using bcftools and idat2gtc version 1.20. GEO accession is GSM5579064 and an example that works on the same dataset GSM557906…
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Hi,
I cannot select an IDAT folder (see attached image); it's just blank and no options to choose from. Same thing with "set working directory" under configuration. "Select file to download" under …
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Hi,
I was trying to calculate age using the predictionAge Func, but always get the same error.
Using the example on guides, works:
> betas_o model predictAge(betas_o, model)
[1] 25.7583
But n…
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cannot handle multiple IDAT chunks
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when i am applying on differenet data set getting below bug messages in log file
02-15 15:45 INFO cuda:0
02-15 15:45 INFO ####################################################################…