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I just stumbled upon this tool and I'm impressed. Looks pretty wonderful.
I work in the Computational Biology Department at St. Jude Children's Research Hospital. I'm the primary author of our [WDL…
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A recent MultiQC update broke the pipeline. I've switched back to a past version and it's running fine, but it would be nice to stay current.
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this is
this is the error code when reaching the multifastq, this is the same pipeline as #1021
I removed some entries to make it readable.
take note the version of my snakePipes
```bash
$snak…
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@zradai @laczkol
As @albertbokor-unideb found out, there's an official Docker image here:
https://hub.docker.com/r/multiqc/multiqc
Oddly there are no instructions on how to use the Docker image on…
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### Description of bug
I ran Picard CollectAlignmentSummaryMetrics and CollectHsMetrics on a couple small downsampled bam files using Nextflow. I've done Picard directly on the command line followed …
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### Description of bug
Hi!
Running v1.24 from bioconda. I'm wondering if https://github.com/MultiQC/MultiQC/blob/9fa4cc6a969fff0c6cd0be09904e894bbee98558/multiqc/plots/table_object.py#L71 and/or…
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### Description of the bug
Hi,
When using sarek for the mapping steps the names in the multiqc general statistics table are a bit strange
![image](https://github.com/user-attachments/assets/b679f99…
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### Description of feature
Having individual QC reports for each sample is nice, but it would be cool to have one aggregated report that gives an overview of all samples to quickly identify problemat…
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MultiQC installation has been updated, modify docker image to account for this.