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Initial data is coming up in which perturbation screens have been analysed using spatial technologies. This workstream should deal with tools to analyse and compare these data.
@Zethson
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This issue covers 3 different types of CRISPR screens.
Related publications:
* https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8443183/
* https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5181115/
* htt…
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According to the [DepMap PRISM repurposing page](https://depmap.org/repurposing/):
> The primary PRISM Repurposing dataset contains the results of pooled-cell line chemical-perturbation viability s…
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Dear Author,
Thank you for developing such a perfect model like C.Origami. It's a great work, but I have encountered some difficulties.
First, I have DNA sequence information from other species,…
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A few changes that would make the Progress Card process more pleasant:
Hide all Perturbations, upgraded cards.
Sort cards at highest upgraded % first. I usually try to put points into cards that wil…
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**Purpose:**
Experiment 78b, which began from the baseline of Experiment 75 in year 101, showed significant initial warming. 78c aims to determine if a perturbed run would exhibit the same behavior…
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To reproduce:
- seed the grid or load a pattern which fills a lot of the grid but eventually "stabilises" while including cyclical patterns (ex: 3 horizontal cells alternating with 3 vertical cells)
…
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### Description
### Steps to Reproduce
Run the following:
```
P = 60110.7723310773
PropsSI('d(U)/d(P)|sigma','P',P,'Q',0,'Ammonia')
```
**Expected behavior:**
We expect the result whe…
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Hello!
I am looking to use these set of filters and algorithms to improve the overall accuracy of my navigation app - after having read [Attitude Estimation for Indoor Navigation and Augmented Real…
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Compute the effective runoff perturbation, after accounting for the surface salinity restoring. e.g. a time series similar to Figure 3c from [Moorman et al. 2020](https://journals.ametsoc.org/view/jou…