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failed to execute: para_RepeatMasker --out_prefix RepeatModeler_out --lib RM_*/*.classified --cpu 4 --tmp_dir para_RepeatMasker.tmp /home/changchuanjun/gene_structure_annotation_20240224/Fuji_Ral-Fuji…
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### Is there an existing module for this?
- [X] I have searched for the existing module
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issue for this…
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Hi
Hi
I am running RepeatMaker nextflow using a custom TE library on a genome assembly. All processes worked successfully unless the last process (combineRMAlignOutput) with the following error (I…
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Currently, repeatmasker_wrapper has
```
Cores Allocated 16
Memory Allocated (MB) 59392
```
A single chromosome works but a whole VGP haplotype fails OOM.
Currently trying to get a RAM grap…
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Hello,
I’m very excited to use TEtranscripts. However, I work with a non-model genome, and there are no gene and TE annotation files available on your website for this species. Would it be possible…
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```shell
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You are running Scasa v1.0.1 using docker ....
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HI ，thinks for your software
now ,I want to align 3 genome ,but it not be masked by Repeatmasker, should i need to maske genome?
Can I use repeatmodeler and repeatmasker to mask the genome? E…
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Hi. I installed RepeatMasker version 4.1.5 and completed configure with Dfam libraries. However, when I run repeatmasker with custom db from RepeatModeler, it creates "general libraries" in the Libr…
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Hi
I am running RepeatMaker nextflow using a custom TE library on a genome assembly. All processes worked successfully unless the last process (combineRMAlignOutput) with the following error (I got …
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1. The first time, I installed EarlGrey **v4.4.0** and RepeatMasker **v4.16**, and I ran around 50 species using this version. The running time of every species was less than 3 days, and those res…