-
Hi,
I am interested in studying protein-nucleic acid couplings, like that of transcription factors and RNA binding proteins. I was looking at the plmc script and was wondering how I should go about…
-
For checking:
```
PMID:1482118 | Genetics of the fission yeast Schizosaccharomyces pombe.
PMID:7011176 | Genetics of the fission yeast Schizosaccharomyces pombe.
PMID:9439701 | Identif…
-
Idea is to:
- filter data for RNAs that are higly expressed but not involved in an interaction
- Use mRNA-Seq data produced in same conditions highly expressed RNAs
- Find expression cuto…
-
# Li, Dong, Wu et al. 2016
## bioRxiv
*http://doi.org/10.1101/086421*
## Abstract
> Characterizing the binding behaviors of RNA-binding proteins (RBPs) is important for understanding
thei…
-
Hi @krchristie
What proteins interact with the RNA polymerase II core promoter? I am looking at annotations to 'GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding' and it see…
-
Even though it would not be possible to allow genes to be in more than one GO bin in the current implementation, it might be nice if a user could reorder the precedence. For example, in the Kilche…
-
Brought to my attention by Colin Logie
**What is the SO term name and accession?**
intronic_splicing_silencer (SO:0002056)
exonic_splicing_silencer (SO:002058)
Both are children of silencer (SO:…
-
**Reported by kchris on 2010-06-12 00:00 UTC**
Hi,
There are some promoter motifs, e.g. the "A_box" that is part_of "RNApol_III_promoter_type_2" that are is_a children of "TF_binding_site", which is …
-
Yeast has
RNA polymerase I core factor complex (GO:0070860)
A RNA polymerase I-specific transcription factor complex that is required for the transcription of rDNA by RNA polymerase I. In yeast the …
-
The [exRNA Atlas](https://exrna-atlas.org/) is the data repository of the Extracellular RNA Communication Consortium (ERCC). The repository includes small RNA sequencing and qPCR-derived exRNA profile…