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**Current Behavior**
Augur version 14 introduced `--tree-builder-args` which allows the user to create a tree with bootstrap values. IQTree has two methods bootstrapping trees, traditional bootstra…
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There now is an entire zoo with fast support measures, e.g., aLRT test and derivatives thereof, ultrafast bootstrap (probably not applicable due to the nature of the search algorithm), quartet-based m…
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Hello,
I am trying to produce ultrafast bootstrap values with IQTREE2 and getting confusing support values. Below are the resulting trees produced from ten sequences with three different commands (…
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## 我的代码:
```
class Predictor:
def __init__(self, args):
self.args = args
self.cfg = DeployConfig(args.config, args.vertical_screen)
self.compose = T.Compose(self.cfg.…
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Hello all,
I am running iqtree v1.6.10 to calculate a snp dataset, but it keeps reporting errors.
command
**$ /ds3200_1/proc/iqtree-1.6.10-Linux/bin/iqtree -s all.LDfilter.thinned.sort.sequences.…
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Hi !
Linux version : Mint 17.3 Cinnamon 64-bits
Kernel : 3.19.0-32-generic
I wanted to test liveMediaStreamer and its WebGUI and after clicking the start button, I get the following error :
`Erro…
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So excited to get this installed and running, thanks for your effort. I'm seeing one issue with my setup, SD streams play fine, but HD streams fail to play. The streams will usually start and immedi…
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There does not seem to be much activity here. Is there an active user community somewhere? Any improvements in the works?
The website simplecarjs.org has a number of broken features:
```
The demo …
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Sequences: 69
IDs ([Virus name list](https://raw.githubusercontent.com/alanrice/RSV_lineage_proposal/main/A.D.1.4X/virusNameList.txt)): EPI_ISL_19116647, EPI_ISL_19001955, EPI_ISL_19001958, EPI_ISL…
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Hello,
I am trying to reroot the Newick tree but each format has some problems.
```Python
import ete3
t = ete3.Tree("((C,D)1,(A,(B,X)3)2,E)R;",format=1)
left_most = t.search_nodes(name='X')[0]…