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Hallo all,
This happens :
```bash
Creating environment from /home/tgeorgom/mambaforge/envs/snakePipes/lib/python3.12/site-packages/snakePipes/shared/rules/envs/wgbs.yaml in /home/tgeorgom/mambaforg…
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Analogous to recent RNA seq quote.
Want WGBS for 116 samples, sending DNA
sr320 updated
2 weeks ago
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Hi, I have some WGBS data and would like to check the copy number variant in these data. However, I am not sure whether CNVkit is suitable for WGBS data since the methylated C is converted to T in WGB…
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Hi, Gabriel Lodom,
Is it possible to use coMethDMR to analyze genome-wide methylation data?
arrayType='wgbs'?
Best regards
Yeduo
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Dear Weilong,
Thank you so much for developing this wonderful tool!
Recently we developed a haplotype-resolved diploid human genome, where one copy is paternal and the other copy is maternal. I…
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Dear authors, @NMNS93 @elarosecadieux ,
I encountered an error when executing CAMDAC::pipeline with WGBS bam file.
The strange thing is that the Battenberg process only completes successfully f…
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Hello,
sorry to bother again. I've been trying to look for the WGBS DNA methylation data, but it does not seem to be available in GEO. Is it available somewhere?
Thank you!
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Hi,
I am coming from [here](https://github.com/huishenlab/sv_calling_docker).
Basically, Delly is one of the tools suggested to identify SVs from WGBS data.
I am wondering to what extent this…
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https://github.com/stephaniehicks/FlowSorted.Blood.WGBS.BLUEPRINT and https://github.com/Bioconductor/Contributions/issues/1207
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Thanks for developing this tool for ceDNA analysis. I have some bam files from generated from WGBS data and am wondering if AmpliconSuite is able to use these bam files as input for ceDNA detecion? If…