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Howdy all,
The broad goal of this hackseq group is, "Inferring sex chromosome and autosomal ploidy in NGS data".
There are a lot of people thinking about this, and in preparation for our hack-a-th…
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Analisando com a equipe de marcação e com a equipe de desenvolvimento concluirmos que a tag ``, pode conter conteúdos variados, ex.:
- `1`
- `1 (suppl)`
- `1 (suppl.)`
- `1 suppl`
Reparem que esse…
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The current lsf resource requirement for the "RnaSeq Cufflinks Expression" step in the RNASeq pipeline is set to mem>64 GB. While this might be pretty fool-proof and work well inside our nodes at TGI …
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Hi Douwe Schulte,
Thanks a lot for developing such a great tool which benefits the whole proteomics community!
I am using several de novo peptideing sequencing tools (including casanovo) that di…
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Is there a discussion platform for this project somewhere? It's hard to see from just this repo what current work is being done, and what contributions I can make.
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**Is your feature request related to a problem? Please describe.**
In my experience MitoHiFi has often not worked and I need to employ another strategy to assemble the mtdna (plus additional organell…
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## Title of the session: Building institutional computational genomics capacity (de novo)
### Session details
* Session type: Breakout Discussion
* Keywords: Genomics, Capacity, Commu…
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I was just reading your nice nature biotech paper and it has more detail now about what the pore-c tools do. I was interested in this graph based concatemer alignment step.
I was wondering why has…
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Genome based transcriptome assemblers like Cuflinks produce large no of transfrags. Are these real? if not, they are likely to impair differential expression analysis of isoforms adding more confusion…