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**DNA processed specimen**
Label: DNA processed specimen
Definition: A processed specimen which is the output of preparing a DNA sample for further analysis
Definition source: derived from NCI Thes…
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Hi,
I am using JACUSA2 to detect RNA editing events with paired RNA-seq and DNA-seq data.
However, DNA-seq and RNA-seq data were mapped to different reference genomes. The reference genomes wer…
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Should we rename the [allow_bad_kmers](https://github.com/oxli-bio/oxli/blob/main/src/lib.rs#L394-L403) option in `consume` to make more intuitive?
This opt is passed to SeqToHashes as the `force` …
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Determined that `DATA-CA` program was mainly for clinical. Uploaded molecular data was to help visualization on dashboard.
A more comprehensive set is needed for workflow testing.
- [x] Make `Seq-…
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Talking about the GO tool which interprets javascript and lisp, etc...
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Hello!
Trying to generate a custom .gfa file but hitting this snag:
```
$ python /home/apps/Aeron/AeronScripts/GraphBuilder.py -e /home/refs/human/dna/hg38_wControl.fa -g /home/refs/human/rna/gen…
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Hi @Moeinh77,I noticed that the longest token length for bert is 512, while the length of the training data is much greater than 512. So does it mean that when processing data, it can be directly trun…
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Could you please provide the following information:
1. example syntax for DNA_FT.py
2. example input and output file pair
3. list of dependencies for installation (preferably using downloads all …
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is MOODS.search() deprecated?
if yes - what function in latest 1.9.4.1 release can help me do that thing?
I am trying to use an old python script and while:
MOODS.search(seq, [bm], 48, algori…
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I'm using Excel-DNA Intellisense for VBA functions, which involves providing a worksheet named `_Intellisense_`. All works great, though I find that new line characters (ascii 10) in the "argument hel…