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Hi there,
Thanks again for the package.
During the Exporting results, I encountered a Warning as below for almost all markers even though I used `PeacoQC::RemoveMargin` to filter out events gr…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/margothenry/PloidyPeaks
Confirm the following by …
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Hi Tyler! Thanks for making this package, it is a pleasure to use it! I am not sure if my issue is related to `flowPloidy` alone, but maybe you could try to help?
`CytExpert` software at my lab som…
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Followed by a discussion with @franasa , @bussec; we have come up with the below schema for cell object.
```
Cell:
discriminator: AIRR
type: object
required:
- cell_id
…
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Dear Sam,
I had first intended on using the CytofBatchAdjust package to try and batch correct my CyTOF data.
[However, you directed me towards this GUI built on top of CytofBatchAdjust.](https://g…
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Hi team, thanks a lot for such a useful tool!
I wonder other than conventional scRNA-seq data, whether Seurat could be used to analyze other single cell data like flow cytometry ones ?
i.e. if…
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I want to gate certain populations of cells on log scale, but I want to plot these subpopulations in histograms on linear scale. The problem is that if I log transform the appropriate channels, there …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/UCLouvain-CBIO/CytoPipeline
Confirm the following…
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Hi All
This issue was discussed in November 2016 at GOC meeting described in the minutes:
Ruth - the need to combine evidence types
Examples: Plasma membrane & integral to plasma membrane: requir…
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Hello
I am working on a clonal organism but we believe more and more it might not be so clonal. We have HiFi data and I want to use them to detect MAF. Is it possible with DeepVariant to detect tha…