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Hi, there:
please see the screenshot below. I previously processed 124 GWAS. Now just added 1 new GWAS. But `pheweb augment-phenos` takes hours, Completed 31 tasks in 95 minutes.
Why pheweb …
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Hi,
Thanks for the invaluable tools and tutorial resources you provided!
I am currently working with imputed data from the UK Biobank, and I have encountered a challenge regarding the storage si…
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Hi Daniel,
My name is Nilesh Dharajiya, MD, and I am a molecular pathologist by training. I came across het.io recently and am very impressed by it. I have been playing with Neo4j since last 3 yea…
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I received the following error when running PAINTORpipe in with AFR as population
`Traceback (most recent call last):
File "/usr/local/bin/CalcLD_1KG_VCF.py", line 268, in
if __name__ == "…
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Dear Prof. Zhang:
I ran the analysis on Linux using default parameters for single-environment analysis, and I noticed that the runtime is quite long. Is there any issue with this? My number of mark…
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Some PMIDs appear in prod version of depo-curation that should not be there, possibly got added in testing.
I've placed the list of PMIDs that needs to be removed from prod: https://docs.google.com/…
ljwh2 updated
3 weeks ago
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How do you recommend running the additive-dominance GWAS? Are there any scripts you can provide? Thanks!
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Please note - details below are going to be discussed in person next week.
See [here](https://genetics.opentargets.org/study/GCST002222) for current Open Targets Genetics study page.
- [ ] Scenari…
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Hi,
We are currently running a partitioned heritability analysis with our annotation and 10 GWAS. Some of them don't include the frequency of the SNP, and even though I have observed that this inf…
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Hi @paul-shannon!
Last year, I pointed you out an issue about a color bug for GWAS tracks in igvR (the whole story [here](https://github.com/paul-shannon/igvR/issues/24)). It is still there in igv…