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Initial group info you provided:
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| Name | Department/Program | Expertise/Interests |GitHub ID |
| ------------- | ------------- | ------------- | ------------- |
| Samantha Sch…
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Hello, would it be possible to make the batch corrected count matrix used to generate the main UMAPs publicly available? This would be very helpful for analyzing the effect different batch correction …
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Hello, I currently have scATAC data with approximately 3.43 million cells and around 160,000 peaks. When I attempt LSI dimensionality reduction using all peaks, it takes an incredibly long time (seemi…
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Feature requests for AIO.
I was working from your Oct 5 release.
1. Shall we just use "genotype information" directly, rather than "donor genotype information"?
Similarly, shall we just use "alle…
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**User story**
I'd like to be able to explore the composition of cell types within a subregion of my dataset, say by manually selecting a region in a scatterplot and then viewing an obsSetSizes plot …
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**Context:**
Following the general HCA meetings in June 2022 (see [here](https://docs.google.com/presentation/d/1ELPE_pEAHxmrbiE9uS8DCkHmV8naChxIqbuTOKSMcFg/edit)) we decided to work directly with the…
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**Hello, I currently want to reproduce the results in SEVtras using data from 15 normal tissues. When I was running the SEVtras.ESAI_calculator function, the following error occurred. I tried for a lo…
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# Navigation component: Add Preview section to tools menu
- Add a Preview section to the tools menu in the navigation component
- Rename (for this menu only):
- Preview: Use Atlas Components to *…
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Comparing prod and prod2 as part of #3782, @achave11 found some insignificant differences in the `/index/project` and `/index/summary` endpoint responses for otherwise identical catalogs. I think it …