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### Description of the bug
Missing output file(s) *.Solo.out/GeneFull_Ex50pAS/CellReads.stats expected by process SINGLERONRD_SCRNA:SCRNA:STARSOLO (JW121_E)
Please fix, why the required file is not …
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I went ahead and added your code from this independent module library to my fork of the main MultiQC repo [here](https://github.com/tanaes/MultiQC/tree/atropos).
Also added a set of some example t…
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Hello!
I see that [the current version of MultiQC provided by IUC in Galaxy Toolshed is 1.11](https://github.com/galaxyproject/tools-iuc/commit/57b36cfbdd1663aef43d03b76e37364cc5bdeef3). According to…
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Atropos (my current favorite read trimmer) has a MultiQC parser and summary module in a PR on MultiQC (see https://github.com/ewels/MultiQC/pull/540). We should update our MultiQC installation to take…
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[WARNING] multiqc : MultiQC Version v1.11 now available!
[INFO ] multiqc : This is MultiQC v1.10.1 (3206687)
[INFO ] multiqc : Template : default
[INFO ] mu…
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I've encountered two errors in the "quantms" module for MultiQC during the "pmultiqc" step:
1. If the experimental design file ("--input" parameter) uses the one-table OpenMS format (see https://ab…
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Create a new topic in docs to enable Genpipes users get started with 5.0 quickly with least hiccups.
Link it in the landing page banner prominently. Cross- Link it in user reference guide and other d…
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### Description of feature
As per title, NanoComp can produce a NanoStats file for multiple files where it just puts the stats in columns. This seems to be a generalization of the current MultiQC exp…
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**Contact person:** HFA
**Problem description:** MultiQC won't be able to parse every single QC file, this is due to various reasons (e.g. mismatch between MultiQC hardcoded parsers and customized …
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I'm creating dynamic publishDir paths (e.g., `publishDir { file(params.output_dir) / "QC/${step}/multiqc/" }`), which breaks the syntax coloring (see attached).
![Screenshot 2024-03-14 at 6 04 41 …