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Hi,
Whenever i run a nanopolish polya run with my dRNA dataset i get an empty file with each read saying 'NO FILE LOADED'. Commands and output as below:
Command: nanopolish index -d /20230927_104…
glf20 updated
10 months ago
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I am getting this error while trying to upload my fast files with the Webin uploader application. The upload works fine but a few days after I get this error below by email for some files. Some FASTQ …
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Hi,
We had an issue which might be interesting for you (and other users).
Whe have a WES sample, and after a bug on a storage system, we only get reads on the chr1 after doing an `intersectBed` of…
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Some exciting news!
The Methods team at Broad recently applied for, and were subsequently awarded a [grant](https://chanzuckerberg.com/eoss/proposals/htsjdk-enhancing-the-java-toolkit-for-emergin…
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Hello there
Thanks a lot already for the work on this package!
I am trying to cluster 34,937,058 sequences of about 1000bp (18S amplicons) contained in a single fasta file, I'm using the following…
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Hi,
I am trying to simulate long reads using simulate.py script. This is the command line I used
./simulate.py --fasta /home/asamy/scratch/ensemble_ref_hg38/Homo_sapiens.GRCh38.dna.chromosome.1.fa…
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The assembly finished but I got this message:
== ERRORs:
* system call for: "['/Volumes/ExternalHD500/SPAdes-3.13.0-Darwin/bin/spades-core', '/Volumes/ExternalHD500/spades_K21_25_33_55_C1/K55/con…
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Following the guide for [wastewater experimental branch]( https://gist.github.com/DrYak/e28d5d523e644ea455748d540a32ad4d). I got stuck in the last stage of vpipe deconvolution as you can see in this e…
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**Is your feature request related to a problem? Please describe.**
I would like to be able to quickly determine what research article I should reference simply from looking at the output of `datasets…
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We want to add some platforms and wonder if this is possible?