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Hi,
I noticed that the coverage value for the step NO2- => NO3- in my nitrogen cycle diagram was substantially higher than expected and I started to manually check the hits for some of the N cyclin…
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I’m trying to find genes obtained from genome and compare with a Virulent Factors database (VFDB), so, not all genes from the genome will give a match against the database; my problem is, if don’t giv…
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Hi!
Thanks for your perfect work! I'm looking for a method which can generate virtual perturbed data. When I notice GenKi can predict the effect after perturbation of certain target, I wonder if Genk…
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# Intro
- Problem statement:
* NCBI records vary in quality
* not available for download as a single data set
* annotation not consistent or difficult to piece together
- Previous 16S data…
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Hi, thank you for your amazing work.
However, I am quite confused about the gene expression input to the model (both paccmann, and RL).
**1. In PaccMann predictor**
Your recent model used rna-se…
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Hi, i got the problem with too many predicted gene models (about twice than the very close relatives) produced by PASA process.
Here is exclusive process of gene annotation:
1) with 5 groups of …
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Hi,
It is very nice to see our tool CodingQuarry (https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-015-1344-4) has been incorporated into the fungal pipeline.
I would like to requ…
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Hi,
I am using EDGE to predict some marker genes, but I did not find function to achieve that goal.
Would you please help me out? Thanks a lot!
Best wishes,
Haidong
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>The rapid progress of gene expression profiling has facilitated the prosperity of recent biological studies in various fields, where gene expression data characterizes various cell conditions and reg…
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Dear developers
Thank you for developing this wonderful tool. Thanks to you, we were able to obtain interesting results using the tool you developed.
However, I have a question regarding FC (Foldc…