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build visit invocation (building using 3.4RC branch):
```
./build_visit --makeflags -j24 --mesagl --mpich --required --optional --uintah --parallel
```
results:
```
Building MPICH (~2 minutes)
…
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It could be nice to have an option for logging the target context before executing the call. E.g. to have easy access to the JobID when going through the log of a failed target, and being able to see …
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I recently noticed that it is no longer possible to pass `--defaultMemory 0` to `toil-cwl-runner`. There's a check in place that enforces its value to be 1 or more. AFAICS this poses a problem when us…
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For single GPU training, every time I run the script, I have to "export SLURM_LOCALID=0", "export SLURM_PROCID=0" and "export SLURM_NNODES=1" before I start the training successfully. My question is f…
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I envision 3 operation modes
In italic are 'nice to have' features that may or may not be difficult to achieve.
## Mode1: shared usage for debugging (default mode for human users)
1. resourc…
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I am following the tutorial for 16.04 and hit a road block after the configure step.
Here is a brief trace:
sh5util.o: In function `_extract_series_table':
/storage/slurm-17.11.12/src/plugins…
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### Steps to reproduce
The `lua` spackage appears to break previously working `slurm` configurations. This behavior has been reported on two different HPE-cray-ex systems, including Perlmutter.
I…
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## Versions
`snakemake` version 8.10.7
`snakemake-executor-plugin-slurm` version 0.4.4
`snakemake-executor-plugin-slurm-jobstep` version 0.2.1
## The problem
I am working on getting `snakemake`…
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It would be good to suggest `scontrol show config` for users to see default values. Or at least somewhere on the sbatch/submitting jobs page, provide standard default values (e.g., DefMemPerCPU = 3810…
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Hi everyone!
I am a sysadmin, trying to help our users run bigstitcher on the HPC cluster. I don't necessarily know how BigStitcher works or what it does, and I am also not too familiar with spark…