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Should this be a component term? I'm not sure that it exists on its own independent of the terminase complex, in the sense that a large or small ribosomal subunit has independent existence in the cell…
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I am having an issue with my grad student putting copies of scripts in his data folders to keep everything "together". I would like to add a specific caveat against this potentially common practice, w…
beroe updated
8 years ago
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Hi,
Im trying to run canu on my local grid using slurm 15.08.8.
When I try and run the yeast x20 example data using:
`
canu
-p asm -d yeast
genomeSize=12.1m
corMhapSensitivity=high corMinCovera…
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I'm having difficulties building the index for my yeast variation graph.
I constructed the graph from a multi-sample vcf with a max node size of 100.
./vg construct -r data/SGD_2010.fasta -v data/SG…
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A few times now I've run into evidence statements more than one of us have suggested near identical changes to. Once clicking submit, it would be great if a warning popped up that "A revision exists f…
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Hi,
I tried to install bcbio_nextgen.py to our HPC. I installed bcbio to a folder called bcbio in my scratch directory.( not in usr/loca/share as it was told in documentation). After installation, w…
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To make content management even more approachable to its editors we plan to use a CMS solution for biojs.net.
One option would be to install Drupal and build biojs.net on top of that.
There might be …
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Hi,
I'm trying to load the genome using the "shared memory" mode to save memory before analyzing several FASTQ files, but an error occur _immediately_ when launching the command :
`STAR --genomeLoad…
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Hello,
I'm using `vg` to build a graph of the MHC region on chromosome 6. I constructed a graph using the [GRCh38 reference sequence](http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/technical/reference/GRC…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/rvalieris/signeR
Confirm the following by editing each …