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Hi,
1. When i used contigs file, no result obtained.
2. But when a subset was made and used for analysis then following result obtained.
3. But No data in warnings folder.
Pls suggest.
Thanks
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**User story**
As a team lead I would like users to be able to submit samples for sequencing on the new instrument type of NovaSeqX so that we can support the latest sequencing technology.
**Who a…
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### Describe the bug
Sequencing Information is incomplete for some files to be submitted in the second CDS release.
There are 8756 unique sequencing experiments associated with files being subm…
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- ~~Generate Illumina Runsheet script breaks on Dilutions and Pools. Need to pull in Index Sequences of parent data for these entities.~~ *on. hold for now, going to re-write script for just NovaSeq X…
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The U.S. Cybersecurity and Infrastructure Security Agency (CISA) has released an Industrial Control Systems (ICS) medical advisory warning of a critical flaw impacting Illumina medical devices.
The …
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https://mp.weixin.qq.com/s/F81LzNgrk4hFpEXDm_1E-A
ixxmu updated
3 months ago
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This my command :
bismark --genome WholeGenomeFasta/ -1 CRR91_f1.fq.gz -2 CRR91_r2.fq.gz --path_to_hisat2 /public/home/software/opt/bio/software/hisat2/2.2.1/ -
-samtools_path /public/home/software/…
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Hi @FelixKrueger
I had a question on what's the correct command line options to be used to generate CX reports.
Based on what you suggest [here](https://github.com/FelixKrueger/Bismark/issues/…
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Hi DeepVariant team,
I have been using DeepVariant （v1.1.0）to call small variants for a human genome with approximately 50X coverage of HiFi reads. During my analysis, I noticed that DeepVariant …
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Hi,
I'm tring to test Deepvariant in my own panel data and set --regins to the interest regin, but something happend in my output. I provided reference gene hg19 and index it with samtools index, a…