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From discussions on 2019-07-10, there are additional relations to add to MF:
PREFIX GoBiologicalPhase:
happens_during: `@` *;
regulates: `@` {0,1};
negatively_regulates: `@` {0,1};
pos…
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Submitting Author: Lluís Revilla Sancho (@llrs)
Repository: [llrs/BaseSet](https://github.com/llrs/BaseSet)
---
- Paste the full DESCRIPTION file inside a code block below:
```
Packag…
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pattern_name: abnormalSizeOfAnatomicalEntity
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormalSizeOfAnatomicalEntity.yaml
description: "An abnormal size (the relative extent o…
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pattern_name: abnormalDegenerationOfAnatomicalEntity
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormalDegenerationOfAnatomicalEntity.yaml
description: "deterioration or loss o…
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I am currently trying to match this pattern:
```
equivalentTo:
text: "%s and ('inheres_in' some (%s or %s)) and ('has_modifier' some 'abnormal')"
vars:
- quality
- entity
- en…
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Question from Mike Huhn re: your pilot project aligning SWEET and ENVO: I see several possibilities and would like to understand which you intend. The possibilities are
1. Augment ENVO with te…
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[decreasedFunctionalityInLocation.yaml](https://github.com/obophenotype/upheno/blob/master/src/patterns/decreasedFunctionalityInLocation.yaml)
'entity' is defined as a class and a variable but is n…
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MONDO:0044013 'puerperal disorder' is a subclass of 'pregnancy disorder'.
But pregnancy goes from conception to birth, while puerperium covers the six-to-eight-week period after birth.
I was going t…
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[abnormalMorphologyInLocation.yaml](https://github.com/obophenotype/upheno/blob/master/src/patterns/abnormalMorphologyInLocation.yaml)
I am confused about the 'position' class declaration:
```
cl…
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[abnormalBehavior.yaml](https://github.com/obophenotype/upheno/blob/master/src/patterns/abnormalBehavior.yaml)
For classes Behavior process is NBO behavior process. Does this mean that GO behavior …