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Hi group!
Thanks a lot for your toolkit Seurat, it is amazing! I would like to know your opinion about somthing I am concerned about. I have done single-cell RNA seq in cortex from three differente…
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For the ICON lab hackathon it is desirable for some data to be digitised to inform network wide sciunit tests. I propose measuring multivariate spike distance (a-synchrony), Spike Train Distance.
Da…
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Somehow, the placement of individual RI alleles causes migration to no longer function. This is a bad thing. Commenting out the RI allele placement section restores migration.
Strangely, when they…
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http://doi.org/10.1101/046508
> Rare cell populations play a pivotal role in the initiation and progression of diseases like cancer. However, the identification of such subpopulations remains a diffi…
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Hi Stephan,
When I am running msmc2 in sep mode on 4 haplotypes I often run in memory issues with the program getting killed by our compute cluster because it is using more than 250gb of memory at th…
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Occurred on [Travis build 387](https://travis-ci.org/agentsoz/bdi-abm-integration/builds/331360169) running `master` commit 181b4900e05a10d9adeae2bb650e3be92f841938.
**When I re-ran the build on T…
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Apparently two of the functions that we use from `scikit-learn` will be deprecated soon. The following appears when running FlowCal 1.1.1 in linux with scikit-learn 0.18.1:
```
/home/sebastian/src…
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Dear SimuPop users,
I am trying to simulate fishing impact on the genetic variability in riverine aquatic species. The idea would be (1) to first find which genetic measures would be the best to di…
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Where is this list? @Blahah probably knows.
If there is an API we can query for species that we pull each day, that would be good. If not, a way to get a dump of it and keep it up to date. Or a way t…
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I have created a network with circular shape. I created it by passing a list of cell (each one with its own x,y,x position) to "popParams".
I conditioned into the "connParams" the cells that will be …
ghost updated
6 years ago