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Hello interested contributors! Welcome to the `covid19-review` project. Our goal here is to provide an up-to-date perspective on the current peer reviewed and preprinted literature around diagnostics …
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### _title_
Microbeville Heroes: The Unseen Battle
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0.45
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Title: "Bacteria United: The Resistance Begins"
In a microscopic world teeming with life, a silent pandemic …
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While looking at the data to determine how we should group for signatures, I noticed a few things:
* In antimicrobial resistence, I noticed some variation in the attribute column. Most entries say …
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Hi Rob,
I am using Bactopia v2.0.3, running the command "bactopia --fastqs fastqs.txt --datasets datasets/ --species "Klebsiella pneumoniae" --coverage 100 --nfconfig /mnt/isilon/bactopia_respub…
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Hello Robert,
In installing bactopia, is there any step that precedes the databases downloading?
Actually, after
conda activate bactopia
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bactopia datasets (isn't moving any further)
Than…
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The wiki states:
>The most recent database release can be found in https://ftp.ncbi.nlm.nih.gov/pathogen/Antimicrobial_resistance/AMRFinderPlus/database/latest and a log of changes with each releas…
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Dear developers,
Thank you for developing mob-suite and making it pubic.
I'm eager to utilize it.
However, I'm facing the following errors in in installing
mob_suite-3.0.0 (either by conda o…
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Hi, I had one question about the installation of this pipeline
I feel quite confused because, during the actual installation process, the README did not mention the need to install **AMRFinder…
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https://github.com/ncbi/amr/blob/master/README.md
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Hi, I would like to request this term as a part of the Canadian Antimicrobial Resistance Genomics Research and Development Initiative (AMR-GRDI) project.
Label: BIOMIC Microbiology System
Parent …