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Hello CSGHub Team,
I hope this message finds you well. I've been exploring the CSGHub platform and I'm impressed with its capabilities, especially in managing large model assets and datasets. It's …
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Hi,
I got the following error message from kallisto quant, but kallisto seems to be on version 0.50.0 and it doesn't explain what those versions refer to.
```
[quant] fragment length distributio…
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## Description
As a bioinformatician, I would like to see what the DNA methylation looks like across all cells in a data set, in a small-ish region, in order to see the data underlying DMRs, enrich…
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Alsalam alikm..
I hope this finds you in the best of states..
So, back again! This time, we continue the theme of variant calling: pipelines and challenges. For this session, the 2 suggested papers …
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**Discussion topic:** Many of us attending iEvoBio are involved in computational biology/bioinformatics education. Here are some considerations for the iEvoBio hive mind's perusal:
1. How do we bes…
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I discovered synpp through https://github.com/eqasim-org/ile-de-france.
This tool is handy. Doing some research, I found that this kind of framework is widespread. They are called "data pipeline" fra…
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https://github.com/coreforlife/meetings/blob/3c6642489d90ea11110db90b10c59bea8250df74/202405-Barcelona/README.md?plain=1#L7
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Most bioinformatics software can be configured either via the command line or via a custom config file. We may want to follow this pattern as well. Recording the segmentation config in the fast5 files…