-
I might have mentioned it before, but there is only a single node with the category `biolink:Exon`: a node with the name `Exon`. I think either the ETL-ing of whatever KP has exon info is borked, or s…
-
Open Targets uses the [slim version of EFO](https://github.com/EBISPOT/efo/releases), which excludes some branches such as `material entity`. We should ensure the automation fetches terms only from th…
-
Example query: https://www.ebi.ac.uk/chembl/api/data/drug_indication.json?molecule_chembl_id=CHEMBL25
ChEMBL API docs: https://www.ebi.ac.uk/chembl/api/data/docs
Example output:
```
{
"drug…
-
EFO-base is not safe to use for generating import modules for other (application) ontologies or merging into KnowledgeBases. However, we have strong use-cases for re-use, given that some parts of EFO…
-
Hi!
Lupus nephritis ([EFO_0005761](http://www.ebi.ac.uk/efo/EFO_0005761)) is defined as _glomerulonephritis always in the context of systemic lupus erythematosus_ ([EFO_0002690](http://www.ebi.ac.u…
-
Especially the age standards. See https://github.com/SciCrunch/NIF-Ontology/issues/49
-
![Screenshot 2022-07-19 at 15.01.57.png](https://images.zenhubusercontent.com/5e95cce7cc796e84ca614069/77a591db-6ccb-4104-879d-260340e9fe14)
EFO duplicates keep appearing on this page in the curation…
-
The following two entries in CLO both appear to be the same immortal cornea-derived cell line, with the same xrefs and only a few different words in the description. Can they be merged?
- https://w…
-
explodes https://github.com/related-sciences/nxontology-ml/issues/35#issuecomment-1766560619
We currently ignore non-diseases, by only training and predicting on terms that are diseases as per [`ge…
-
I’ve noticed a few ontologies coming from OBO (MAMO and KISAO specifically) are using SKOS for prefLabel, synonym and definitions. If we are going to get the config for these from OBO then it would be…