-
Hello,
I'm trying to submit a tool (EGSEA) to IUC but it's failing Travis (here: https://travis-ci.org/galaxyproject/tools-iuc/jobs/332650210#L1606) because of a current bug with GALAXY_SLOTS in G…
-
BLAST+ can be used with the NCBI taxonomy files, particularly for building databases - can we tie this into Galaxy's ``ncbi_taxonomy.loc`` allowing versioning vs the current behaviour of implicitly us…
-
MTS: https://toolshed.g2.bx.psu.edu/view/rnateam/chipseeker/b418a1d3585d
Use-case examples here: https://github.com/galaxyproject/tools-iuc/issues/2370
-
Hi there,
The tools `rna_star` and `rna_starsolo` use indices produced by the data manager `rna_star_index_builder_data_manager`.
Currently the last version of STAR is 2.7.10b and the earlier versio…
-
# The issue
When collections are created as a tool output, the Galaxy tool author can declare output element names by referencing input datasets. However, this feature is poorly documented and seems…
-
cc @jmchilton @hmenager
- planemo lint should warn on missing
- need to add to tools iuc
- need to make a PR that marks this as best practice.
-
The first column is a number of times the given tool triggered implicit conversion (decompression) of a compressed fastq dataset in last ~6 months on Main.
If we could ensure the tools can work wit…
-
In the IUC tool developers best practice guidelines https://galaxy-iuc-standards.readthedocs.io/en/latest/best_practices/tool_xml.html#tests we stress tools should have tests, and encourage this with …
-
@galaxyproject/iuc What is the process for handling tools like MultiGPS (https://github.com/galaxyproject/tools-iuc/pull/1227) that pass the standard Galaxy functional tests outside of the travis envi…
-
There is a bug in ampvis2 that brakes the wrapper if specific taxa should be shown.
It errors with:
```
Error: unexpected symbol in:
"
showRemainingTaxa"
Execution halted
…