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Dear Atul,
I run your pipeline SPARTA.py with this command:/usr/bin/python3.4 sPARTA.py -featureFile redundant.fa -miRNAFile endogenous_sRNAs.fa -genomeFeature 0 -libs Tally_library1.txt -tarPred -…
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Can set -genomeFeature as 0 and 1 at the same time?
`python3 sPARTA.py -genomeFile IWGSCv1.fa -annoType GTF -annoFile transctipts_merged.gtf -genomeFeature -miRNAFile miRNA.fa -libs -tarPred -tarS…
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My command
`python3 sPARTA.py -genomeFile IWGSCv1.fa -annoType GTF -annoFile transctipts_merged.gtf -genomeFeature 0 -miRNAFile miRNA.fa -libs SRR1197125.chopped.trimmed.processed.txt SRR1197126.chop…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/KechrisLab/multiMiR
Confirm the following by edit…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/sbhattacharya3/IntramiRExploreR
Confirm the follo…
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All the TFs (to be used for TemplateReactionRegulation/controller) are there created as Rna rather than Protein, why?..
Sounds like a mistake.
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What are miRNAs?
What are two methods to identify miRNAs in sequence data?
sr320 updated
8 years ago
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Creating manifest of installed packages in /opt/bcbio/manifest
Third party tools upgrade complete.
Installing additional tools
Upgrading bcbio-nextgen data files
Initialized empty Git repository in /o…
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Howdy all, and thank you for your interest in this hackseq!
I'm hoping we can all introduce ourselves ourselves and start some conversations before we meet in Vancouver.
I am an assistant profess…
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Dear Editors,
I'd like to request a new term re: PMID:23069713
In this study inhibition of epidermal growth factor receptor (EGFR) was shown to promote cardiogenic differentiation of human Mesenchyma…