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Hello,
I am sorry to distrube you again about my task to search used the FragPipe.exe. The specific dataset and log files of my searching task are placed in the below link.
please give me a hand i…
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please see attached files. thanks!
[Task2-GPTMDTaskconfig - Copy.toml.txt](https://github.com/smith-chem-wisc/MetaMorpheus/files/3693392/Task2-GPTMDTaskconfig.-.Copy.toml.txt)
[Task3-SearchTaskc…
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In cases where multiple hits are found for a single query fasa, only the category of the latests hit is reported and the previous ones are overwritten. This may result in marking a peptide as novel so…
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A des fins de test, pourrait-on déployer sous dev-migale -> ProteoRE -> Other tools section
cet outil développé par Galaxy-P : http://galaxyp-proteogenomics.duckdns.org/?tool_id=toolshed.g2.bx.psu.e…
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Better support for some concrete file formats (mzQuantML, mzTab, others,… proteogenomics approaches). We would just create new file tags.
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@chandrans commented on [Wed Jan 17 2018](https://github.com/broadinstitute/dsde-docs/issues/2852)
Is FastaAlternateReferenceMaker going to be in GATK4? I did not see any mention of it. I hope oth…
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I don't know if the workflow "proteogenomics" exists, but it that's not the case, create it.
For those types of datasets, make mandatory the submission of database files (for both complete and partia…
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I use the command line to process the MSFragger,but the result files which genarated by MSFragger were not be understand when I want to found the identified PSM, peptides and proteins. another questio…
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Hi Gerhard,
When I run the validator on mzIdentML v1.2 files, the following warning messages were given:
> Message 1:
> Level: WARN
> --> unanticipated terms for XPath '/MzIdentML/Seq…