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`remove_lcr` was deprecated in 2018: https://github.com/bcbio/bcbio-nextgen/commit/17d8bb0623888a55a0c1b7ba52f1dd0f9d4dc5b4 (see also: https://github.com/bcbio/bcbio-nextgen/issues/3267#issuecomment-6…
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### Abstract
High throughput sequencing technologies have been proved useful in a plethora of omics. Epigenomics is an area of active research that innovatively blends different biological techniqu…
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Hello deeptools!
I am running into an error while attempting to computeMatrix. I am using deeptools 3.5.1 and Python 3.7.6. Although my input bigwigs are processed similarly there seems to be issu…
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### Enzyme, ADAR (proof-read and correct mistakes in RNA)
[**ADAR editing enzymes** are found in all multicellular animals and are conserved in sequence and protein organization. The number of ADAR g…
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Hello @tkik @MaxSchoenung @HeyLifeHD @lutsik ,
As a part of the package it would be nicer to have an example `data` for testing/demonstration. Bsseq has `BS.chr22` which can be loaded with the comm…
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**What is this request referring to?**
GREEKC has pointed out that SO has a term epigenetically_modified_region (SO:0001720) but the definition states that the biological region is implicated in **in…
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Create a section for each environment that helps a user transition to using the tool/environment in AnVIL
kozbo updated
3 years ago
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I had an interesting conversation with Andy Jenkinson about the ids, reference sources and URLs of a schema type. When I tried to explained this with the examples it was not as easy as I expected. I t…