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Dear Shujun,
Can you give us a script to identify soloLTR based on the annotation file of EDTA,the script of LTRretriver to identify solo_LTR can hardly suit the outcome for this software
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The procedure for determining partial credit in hap.py's `xcmp` takes into account the sex of the query sample (and thus whether the X chromosome is haploid). I don't see a parameter for the sample se…
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Hello
I am working on a clonal organism but we believe more and more it might not be so clonal. We have HiFi data and I want to use them to detect MAF. Is it possible with DeepVariant to detect tha…
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Hi, I'm Jaebeom Kim working on metagenomic classification.
I want to ask a question about reference databases used in the taxonomic binning challenge.
I can find three reference sequences on the C…
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**Is your feature request related to a problem? Please describe.**
Isaac said we should try this. More details to come when I'm not tired. -Tim
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*************edited November 20***************
**TRACKER**
BA.2.86: -C6541T,A7842, C8293T, G8393A (new query thx to @aviczhl2 )
JN.1 QUERY: C18894T, T15756A, A7842, -C6541T
XDD Query : C6541T…
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Hi Oliver,
Thank you for developing Bakta. I really enjoy using it. I came across some issues while running it, here are some that I find worth reporting:
## Regarding user specified reference gen…
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Hi
I've been reading and working through various tutorials and bits of documentation, and have found the `alevinQC` package very helpful for understanding what is going on with the `generate-permit…
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Request to globally add the NCBI issued by agent to all records with a GenBank identifier.
Currently the only two NCBI identifiers in Arctos are GenBank and BioSample identifiers. Both of these shoul…