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# Abstract
Unipept is an ecosystem of tools for the taxonomic and functional analysis of (meta)proteomics datasets. The Unipept project aims to be an easy-to-use and very accessible tool by providing…
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Hello,
I have just begun using STAGEs. It has been very helpful so far. When running the GSEA Pathway analysis I received an "error running app" message. Now I cannot launch the program from https://…
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Hey, sorry for bothering you with more issues.
I have an error with the pathway analysis could you please help me.
I am running seaborn 0.11.2 on Python 3.10.11
![Unbenann2t](https://github.com/sae…
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I met a problem when using CellChat. I wanted to know whether the CLEC pathway existed in my data. First, I analyzed the expression of the ligand and receptor of this pathway in my data and found that…
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**Background**:
Pathway diagrams are widely used in genomics to describe changes occurring in signaling pathways resulting from genomic alterations. There are [several tools](https://www.ncbi.nlm.n…
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Similar to Gene Ontology, our collection of annotated pathway figures can be hierarchically organized, i.e., the contents of some figures partially overlap or are sometimes subsets of others. We shoul…
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### Request
Increased clarity in path details:
1. When clicking on a portion of the ring label displays %Remain and %Diff; can these be changed to be more clear; something like "% in Path" and "% no…
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We received reviews back from the journal, and one suggestion was for us to expand the machine learning prediction analysis.
Currently, we are using both L1000 and Cell Painting data to predict com…
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### **Glycolysis**
- **Accuracy**: The model correctly represents glycolysis occurring in the cytoplasm, where each glucose molecule is converted into two pyruvate molecules, yielding a net gain of…
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Hello, I am a student of biomechanics from Brno University of Technology and I read your article where you use IFM calculator. It looks like a great method for my numerical analysis, but I have a prob…