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I've just done a code complexity check using [Radon](https://pypi.org/project/radon/). It's the same software also used by codefactor to find the complex functions that need fixing. The result of the …
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Right now, the TRUE or FALSE variant screening results for trio analysis include parent-child inheritance checks, as well as other criteria that make a variant suspicious. However, for followup analys…
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Hello rMATS community,
I'm new to alternative splicing (AS) analysis and seeking guidance on a few topics. Any help would be greatly appreciated!
1) When running a paired analysis with the --paire…
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### Description of feature
We would like to extend this pipeline logic to allow processing of data and model described bellow. Can you suggest how we should approach this topic?
Consider the follo…
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Dear Giovanni,
Thank you for your nice software. I am using scAllele for the detection and analysis of variants using scRNA-seq. I wonder how you get the information about 0/1 or 1/1 in Figure 2E of …
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Comparing
https://github.com/PacificBiosciences/trgt/blob/main/repeats/pathogenic_repeats.hg38.bed
to
https://github.com/broadinstitute/str-analysis/blob/main/str_analysis/variant_catalogs/varia…
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`org.openrewrite.staticanalysis.FinalClass` works on wrong assumptions. A non-final class with no public constructor can have nested static sub classes, and in that case it cannot be made final.
##…
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for `MainDashboard.js` `Analysis.js` `Logging.js` `Reports.js` `Settings.js`
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The scripts and steps followed to run susie using in-sample LD on the meta-analysis GWAS results:
- Computing LD and converting to matrix format for running SUSIE (Fri, 23:37, 21-Jun-24).
- Susie…
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In #129392, I fixed a couple [soundness holes](https://github.com/rust-lang/rust/issues/117288) having to do with the distinction between values and places and the `!` type, which has special divergen…