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First I built the dabatase with:
`cazy_webscraper --classes AA`
Then I tried:
cw_get_uniprot_data --families AA17 -s
And I got this output:
```
Built output directory: .cazy_webscraper_…
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Hello.
I am studying an organism that requires me to make an orgdb object. I followed the tutorial to do so with AnnotationForge using both my organism and the one it provides as an example, but wh…
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Hi, I was running SqueezeMeta (v 1.5.1) on coassembly mode with the following command:
>SqueezeMeta.pl -m coassembly -p metagenom_run_final -s /media/bioinfo/hdd2/final.samples -f /media/bioinfo/hd…
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Hi,
I was running SqueezeMeta in coassemly mode with the following command:
home/bioinfo/anaconda3/envs/SqueezeMeta/bin/SqueezeMeta.pl -m coassembly -p metagenom_run_final -s /media/bioinfo/hdd2/fin…
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Hi, I want to see the abundances of CAZY enzymes in my metagenome data. I am using cazy database as my external db. So, if I run SqueezeMeta conventionally including --extdb, will the result of functi…
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I'm not sure there actually is a microcode update, but Needrestart thinks there is. Rebooting does not make a difference. I believe this started either after a recent update to `linux-firmware` or af…
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- [x] I checked and didn't found a related issue,e.g. while typing the title
- [x] ** I got an error in the following rule(s):**
- [x] I checked the log files indicated indicated in the…
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- [x] I checked and didn't found a related issue,e.g. while typing the title
- [x] ** I got an error in the following rule(s):** ` `
- [x] I checked the log files indicated indicated in …
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## Describe the bug
When using `cw_get_uniprot_data` to retrieve data from UniProt, no data is retrieved and added to the local CAZyme database
## To Reproduce
1. Build a local CAZyme database:…
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**Are you using the latest release?**
That's the point :laughing:
**Describe the bug**
Is there a plan for officially release a new (1.8.14?) version of funannotate? Currently the galaxy tool/wo…