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For a voxelwise WB, the display of results seems to threshold the non-parametric p-value images when an FDR or an FWER correction is used (see `xCon(Ic).VspmFDRP` and `xCon(Ic).VspmFWEP` in the code b…
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These 4 `.tsv` files points to different BAM files. Maybe we can just use one set of `fastq` files and fwer `.tsv` files:
https://github.com/mskcc/vaporware/blob/master/tests/test_make_bam_and_qc.tsv…
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File "C:\Users\shelton\AppData\Local\Programs\Python\Python36\lib\site-packages\multipy\fwer.py", line 28, in
from logger import log_fwer_analysis
ImportError: cannot import name 'log_fwer_anal…
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hi,
What is the meaning of the pvalue column after running diffSplice? Is this a BH "adjusted p-value" (similar to a q-value with pi0 = 1)? How is `alpha` used?
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Calculate family-wise error-rate adjusted p-value for correlation of predictor with each feature.
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Working on the issue #103 (related to a post-hoc masking issue), I have noted that the display of results for clusterwise WB does not behave appropriately.
Indeed, after running the results module…
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Using our data, check the correlation among the DLPFC and HIPPO gene expression.
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project directory zipped and attached
[FinanceSeerV2.zip](https://github.com/Microsoft/vscode/files/2230321/FinanceSeerV2.zip)
Issue Type: Bug
![image](https://user-images.githubusercontent.com/6…
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Hi,
I noticed that `summary(shc_result)` reports `dissimilarity = euclidean` when I specify a custom `matmet`. My understanding is that the `matmet`, `vatmet`, and `metric` are mutually exclusive.
…
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- Repository: https://github.com/crbasel/hierinf
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