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For a brief time, I enabled `bin/tests.sh` (i.e. the "mega-melt") on Travis CI. Unfortunately, there were problems.
Here is an example Travis build ([build 467](https://travis-ci.org/github/scijava…
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**Submitting author:** @wrightaprilm (April Wright)
**Repository:** https://github.com/wrightaprilm/treesiftr
**Version:** v1.0.0
**Editor:** @juanklopper
**Reviewer:** @ethanwhite, @rachelss
**Archiv…
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Hi all
I am trying to analyse .swc reconstructions done with neuTube (at least neuTube_win64.2018.07.12), and attempting to extract some features. With neuroM 3.2 n**umber_of_terminations, soma_rad…
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## Description
When used with large arrays, `morphology.reconstruction` crashes my Python kernel (without any other error - I just see `The kernel for xxx.ipynb appears to have died. It will restar…
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Certain morphologies (mainly neuronal) have almost zero-radius samples. This issue makes reconstructing a single and continuous manifold almost impossible. Therefore, we must implement a feature to de…
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Hi @espdev ,
I hope you had a good weekend :)
I'm trying to use the `mpe` to find a path, but received an error message which I cannot understand why it happens.
To my eyes, the entry and exist…
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Ensure that in all the mesh builders that the name of the final mesh is similar to the morphology name.
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By switching to another morphology storage structure we'll have to reimplement our SWC import code. I've disabled it in the `soa-morphologies` branch for now since we only use arborized models for our…
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This issue came to light investigating [RTX issue 1774](https://github.com/RTXteam/RTX/issues/1774), which was first reported by @dkoslicki.
On the KG2.7.4pre Neo4j database server `kg2endpoint3.r…
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Hi,
The octopus model works for 'guinea', but not for 'mouse'.
In `Octopus` class, the data table for mouse's octopus cell is `XM13_channels`. However, in that data table, there's no column for II-o…