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### Model Name
H3D virtual screening cascade light
### Model Description
This panel of models provides predictions for the H3D virtual screening cascade. It leverages the Ersilia Compound Embedding…
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I am trying to introduce variance via a VCF file but when i try and do so NEAT will skip a large proportion of these variants and i'm not quite sure why (although i think it might be syntax that NEAT …
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Hi @fenderglass ,
I have assembled one clinical isolate of _Mycobacterium tuberculosis_ using flye which gave me a result of 2 contigs. One contig of length 3.83 MB and the other 0.57 MB. One of th…
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From today's multiorganism call - the group proposes to obsolete the following terms:
- [x] 'induction by symbiont of host defense response'
- [x] 'induction by symbiont of defense-related host c…
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Context: Running the pipeline on a `macOS` machine with condo-local environment
The resulting FASTA didn’t have any variants owing to small differences between sed on Linux and macOS leading to a f…
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I get warnings when attempting to `makeSignatures` for antimicrobial resistance, length, and width:
```
Warning messages:
1: No signatures for antimicrobial resistance (categorical). Returning NU…
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@lwaldron, @kbeckenrode, some PATRIC_IDs belong to the same Taxon. Should the annotations of these PATRIC_ID's be merged into a single entry (row)? The PATRIC_ID field/cell could be `"1733.103, 1733.2…
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Hello Dr. Maria Nattestad,
I am a PhD student researching Mycobacterium tuberculosis genomes with long read sequencing. Assemblytics is one of the variant callers we are using to study structural …
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Hi,
I tried to run --snp_dist but encountered the error in below.
Could you help me to resolve this issue ?
(tb-profiler) kansensho@MAC:/mnt/d/RIT_fastq_20221213_MTBseq$ tb-profiler version
…
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NTR: perturbation of host inflammasome-mediated signal transduction