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possible errors to start human mtg or generate human mtg data. I did experience similar issues last week, worked around manually, today, it happened again. Nice to look into to avoid potential iss…
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[supplementary-material](https://www.biorxiv.org/content/10.1101/2022.10.12.511898v1.supplementary-material) - table2
Column: `Top three regions`. Record location for all regions with > some thres…
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We need documentation on what goes into PCL (as opposed to CL)
- eg If there isnt coherent set of properties and the cell type is grouped just by transcriptomics
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[//]: # (You can add comment regarding your issue hereafter)
### Comments
Transcriptomics is currently a direct child of both Gene expression and Transcriptomics, which is itself a direct child of G…
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Saw this from Constantin @const-ae
https://twitter.com/const_ae/status/1620368045846970370
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The title is the Q really - I have matched spatial transcriptomics data and bulk RNA-seq data and want to deconvolute the spatial data with the bulk data. Is this possible with cell2location or some o…
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@mkuhring will provide further specifications later.
It might be two apps, one for genomics and one for transcriptomics.
**TBD:** Exact specs, schedule, etc.
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Hi there!
Many thanks for this super detailed and COOL datasets. It has been a huge help for my current project :).
Just wondering if you may share the original scanned H&E images for spatial t…
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Example files, **uploaded via URL or browser**:
- https://zenodo.org/record/290221/files/dexseq.gtf
- https://zenodo.org/record/290221/files/Drosophila_melanogaster.BDGP5.78.gtf
Test history:
…
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Thank you for creating Tangram,
incredibly useful and impressive tool, for cell deconvolution in spatial transcriptomics.
I wondered if Tangram has the ability to detect cell type specific expr…