AllenInstitute datacube issues

AllenInstitute / datacube

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catching up release branch

#116 dyf closed 2 years ago
0
seeing two mouse_ccf UP from http://tdatacube:8080/cgi-bin/apptest.cgi

#115 shus2018 closed 5 years ago
1
possible errors to start human mtg and/or generate human mtg data

#114 shus2018 opened 5 years ago
4
bad request for datacube can cause human mtg service restart

#113 shus2018 closed 5 years ago
2
cgi-bin/apptest not working

#112 shus2018 closed 5 years ago
2
generate summary stats jsons offline as opposed to on startup

#111 chrisbarber opened 5 years ago
0
Use jinja for datasets.json and env-vars.json files instead of python Template strings

#110 chrisbarber opened 5 years ago
1
seeing invalid JSON format from default config example

#109 shus2018 opened 5 years ago
3
legacy route/http bridge config missing from default config example

#108 shus2018 closed 5 years ago
1
seeing one existing example regression from current tdatacube deployment

#107 shus2018 closed 5 years ago
2
please add dataset's requirements to conda environment.yml/import wget failed for human mtg data

#106 shus2018 closed 5 years ago
2
maintenance release

#105 chrisbarber closed 5 years ago
1
datacube should auto-generate new data on each restart if there are new data exist

#104 shus2018 opened 5 years ago
1
automated dev deployment accumulating open file handles to deleted data files

#103 chrisbarber closed 5 years ago
1
add human mtg dataset (#99)

#102 chrisbarber closed 5 years ago
0
remove xarray monkey patches in connectivity generation script

#101 chrisbarber opened 5 years ago
0
editable and multi-version do not work well together in pip

#100 chrisbarber closed 5 years ago
0
human MTG transcriptomics service

#99 dyf closed 5 years ago
7
move conn bridge into web resource and improve logging

#98 chrisbarber closed 5 years ago
3
investigate why many file handles are open in production, fix if necessary

#97 dyf closed 6 years ago
1
projection data returned "NaN" from latest deployment including latest data refresh

#96 shus2018 closed 5 years ago
3
consider update allensdk version to 0.14.5

#95 shus2018 closed 5 years ago
1
fix double-logging from conn bridge, remove unnecessary inlinecallbacks

#94 chrisbarber closed 6 years ago
0
use python unbuffered for logging and cgi

#93 chrisbarber closed 6 years ago
1
enable auto reconnect

#92 NileGraddis closed 6 years ago
0
dev and test environment needs warehouse port configuration

#91 chrisbarber closed 5 years ago
1
clean up or templatize crossbar configs

#90 chrisbarber closed 5 years ago
1
configure websocket client autoping to serve as tcp keep alive

#89 chrisbarber closed 6 years ago
2
investigate 5min timeout, see if it can be turned off

#88 dyf closed 6 years ago
1
use xrelease/deploy_datacube.yml on tdatacube for consistency across environments

#87 chrisbarber opened 6 years ago
2
run bamboo build agent and datacube deployment as appropriate user on devdatacube

#86 chrisbarber opened 6 years ago
1
AWS lambda backend for searches or other reduced RAM solution

#85 chrisbarber opened 6 years ago
0
Healthcheck at /cgi/apptest.py generates stack trace when requested by simple client

#84 byoungstrom closed 5 years ago
3
remove relatively useless thread pool stats logging from datacube

#83 chrisbarber closed 5 years ago
1
implement log cleanup

#82 chrisbarber opened 6 years ago
0
implement exponential backoff in `loop.sh` and `run.sh` scripts

#81 chrisbarber opened 6 years ago
0
deprecate special `filter_cell_specimens` in favor of `raw`

#80 chrisbarber opened 6 years ago
0
should exclude "pixel = None for len() check in preprare_file

#79 shus2018 opened 6 years ago
0
more efficient payload format for streamlines

#78 chrisbarber opened 6 years ago
1
split up correlation filters into `filters` and `mask`

#77 chrisbarber opened 6 years ago
0
align masks prior to ANDing in `mask_field`

#76 chrisbarber closed 5 years ago
0
force inclusion of seed in correlation search filters

#75 chrisbarber closed 6 years ago
6
prevent pipenv from accumulating files in tmp/

#74 chrisbarber opened 6 years ago
1
rename services/pandas/ to services/datacube/

#73 chrisbarber closed 5 years ago
2
move legacy_conn_routes into services/

#72 chrisbarber closed 5 years ago
2
move to pipenv for all services

#71 chrisbarber closed 5 years ago
1
create status/ page which consolidates individual status calls

#70 chrisbarber opened 6 years ago
2
rows, num_rows and sort_order not working(different from current prod) for conn correlation search

#69 shus2018 opened 6 years ago
3
incorrect mouse_ccf (possible other service as well) call can crash datacube server

#68 shus2018 closed 6 years ago
6
implement sort on datacube `raw` call

#67 chrisbarber closed 5 years ago
1