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Dear Ryan,
thanks for developing Bacsort. I'm trying to run it on a bunch of genomes from isolates and cluster_genera.py fails every time, but I can't interpret the error. Do you have any ideas or di…
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Hi! I'm encountering an issue with Trans-Abyss that appears to be a problem in the code. When executing the abyss-filtergraph command, it seems that too many arguments are being passed to the function…
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**Describe the bug**
Have been running nextdenovo (v2.4.0) for the last couple of months for a de novo genome assembly (total genome size of 2.5 GB). The program took two months to finish the jobs …
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- [x] I've read the [CONTRIBUTING](https://github.com/sbt/sbt/blob/develop/CONTRIBUTING.md) guidelines
## steps
If I have a project `project1` that has a dependency (compile) to a library
And a p…
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In the output GFA file (strainy_final.gfa), some unitigs in L lines do not have corresponding S lines. This may be due to attempting to remove the unitigs at some point (and removing their S lines) bu…
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Thank you so much for creating this amazing tool! The only question I have is that the hybrid assembly worked beautifully for all of my isolates except for one. I have inputted the short reads and lon…
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## To Reproduce
Run the command install-module Microsoft.Graph.Users
Run the command import-module Microsoft.Graph.Users
Error is produced
```
Commands you ran
install-module Microsoft.Graph.Use…
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Hi,
I have a question of purge dups output.
The left graph is a genome assembl…
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Hi Ivan,
I am a big fan of your graphmap project and have used it myself to sort out different pathways/haplotypes in an organelle assembly graph. I am facing a new problem which I think raptor wou…
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Hello,
I wonder if and how it would be possible to build a genome graph for a set of plant genomes.
I will have a few (4-8) de novo assemblies in fasta format, is that sufficient to generate a graph…