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Nextomics
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NextDenovo
Fast and accurate de novo assembler for long reads
GNU General Public License v3.0
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Accepted a killed signal and killing all running jobs, please wait...
#213
WengangXbio
opened
1 week ago
0
Running out of disk space
#212
oskesr
closed
1 week ago
3
ModuleNotFoundError: No module named 'paralleltask'
#211
WengangXbio
closed
1 week ago
4
NextDeNovo running for >4days with no expected outputs
#210
RominaSSBatista
closed
1 week ago
22
ctg_graph error, (core dumped), returned non-zero exit status 134".
#209
usersHuangKun
opened
1 month ago
0
assembly problem
#208
yao-chenxin
closed
1 month ago
2
Update README.md
#207
moold
closed
1 month ago
0
db_stat failed, @d84e39c8-130c-4159-bfa9-5393ad703a1a does not exist!
#206
franztastic
closed
1 month ago
2
Update QSTART.rst
#205
moold
closed
2 months ago
0
I want to correct ONT with HiFi data
#204
YouxinZhao
closed
2 months ago
1
Timing out on minimap-nd tasks
#203
wgallin
opened
3 months ago
4
For low base quality of sequences
#202
YouxinZhao
opened
3 months ago
1
Test won't run
#201
JWrighty97
closed
3 months ago
1
How to improve the N50 and reduce contigs numbers?
#200
cj2jy
opened
3 months ago
7
hello , i used the nextdenovo to assemble the ultra large size genome of 23g, the fq only 270g, just want to assemble the grapgh
#199
Jiangjiangzhang6
closed
3 months ago
7
When run nextdenovo with test_data failed
#198
sumoii
closed
4 months ago
1
ctg_align failed
#197
jjssuuhh
opened
4 months ago
4
Question about error rate for correction
#196
mylena-s
opened
7 months ago
1
ERROR：the input data is insufficient for an assembly
#195
Argonum-Clever2
opened
7 months ago
3
Error: db_stat failed ?
#194
carla-hazelf
opened
8 months ago
1
init requirement for Read the Docs building
#193
moold
closed
8 months ago
0
Fixed issue with Read the Docs build failing
#192
moold
closed
8 months ago
0
init Read the Docs configuration file
#191
moold
closed
8 months ago
0
init consent cns data
#190
moold
closed
8 months ago
0
Does NEXTDENOVO filter the contig before output?
#189
cfz1998
closed
9 months ago
2
sort_align step erro
#188
ld9866
opened
11 months ago
1
fixed `Make` issues
#187
moold
closed
11 months ago
0
Dev
#186
moold
closed
11 months ago
0
sync
#185
moold
closed
11 months ago
0
No assembly file after running NextDenovo
#184
RacheliHadjez
closed
1 year ago
1
[4501 ERROR] 2023-06-13 22:29:40 the input data is insufficient for an assembly.
#183
Evansd36
closed
1 year ago
3
telomeres getting lost
#182
JWDebler
opened
1 year ago
6
Can I assemble a gap free genome using only regular ONT data?
#181
XXH123a
closed
1 year ago
1
long time for assemling genome
#180
ejlladkw
closed
1 year ago
6
TypeError: unsupported operand type(s)
#179
ianaebutler
closed
1 year ago
2
Can you run nextDenovo without a config file?
#178
JWDebler
closed
1 year ago
1
Segmentation fault (core dumped) at 03.ctg_graph/01.ctg_graph.sh.work/ctg_graph0
#177
agesantos
opened
1 year ago
1
Samtools sort out-of-memory
#176
RenscoHogers
closed
12 months ago
2
Unable to run test data on macOS
#175
ianaebutler
closed
1 year ago
4
non-zero exit status 137, error info: . - assembly still finishes though
#174
JWDebler
closed
1 year ago
5
Low performance with highly repeated regions
#173
leone93
closed
1 year ago
1
NextDenovo Parent Job Failed, No Error, Subtasks still running
#172
harveyzac
opened
1 year ago
1
about the ParallelTask for the nextdenovo
#171
fly005304
closed
1 year ago
1
Assembly is running around a month and going strong - or is it stalled?
#170
000generic
opened
1 year ago
15
Dev
#169
moold
closed
1 year ago
0
[ERROR] failed to find seq file type or empty file after ctg_graph
#168
etd530
closed
1 year ago
5
Non-zero exit status 134
#167
FabianDK
opened
1 year ago
2
Only one sample or multiple samples can be used in nextdenovo?
#166
Neo-xbx-00
closed
1 year ago
1
Error in cns_align1 step
#165
lidachuis
closed
1 year ago
2
What's the difference between -A and -q 10 in nextgraph_options
#164
Yutang-ETH
closed
1 year ago
12
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