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While using [FBs fastText Python lib ](https://github.com/facebookresearch/fastText/tree/master/python) the [BioWordVec](https://ftp.ncbi.nlm.nih.gov/pub/lu/Suppl/BioSentVec/BioWordVec_PubMed_MIMICIII…
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We've gotten some good responses on our survey (https://github.com/deepchem/deepchem/issues/1722) about the future of DeepChem, and are starting to think about synthesizing the responses together. As …
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Hi there,
I extracted the region of bam file chr6:28000000-34000000, and ran CNVnator as follows:
step1: cnvnator -root ${SID}.root -tree ${BAM}
step2: cnvnator -root ${SID}.root -his ${BIN_SIZE} …
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I came across the preprint for this package and have some thoughts on alternative representations. I think the premise that a bar chart is easier to read than a pie chart is not particularly convincin…
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Hello,
We recently received a few outside queries as to whether we were planning to be involved as a repository data source for DataMed and I wanted to reach out to see if this would be possible. …
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**These comments provided by @ianfore over the monthly testing.**
A link to the repository list in bioCADDIe would be useful as part of this text "The data repositories covered in this initial rele…
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Hi,
I wanted to reproduce results from table 1 from the paper (BioASQ only, Experiment (1) ). I have been using the default settings from the README file. This is my setting
python biomedical_qa…
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> Autoencoders provide a powerful framework for learning compressed representations
by encoding all of the information needed to reconstruct a data point in
a latent code. In some cases, autoencoder…
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Hi,
Thank you for this excellent work on normalization/entity linking.
As you say in your readme, it is not easy to collect the data.
In particular, it seems that the test set for TAC 2017 ADR is …
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