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The GREGoR (Genomics Research to Elucidate the Genetics of Rare diseases) Consortium seeks to develop and apply approaches to discover the cause of currently unexplained rare genetic disorders.
- L…
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How do I explain the decision of a neural net trained with multimodal inputs (e.g., a multimodal autoencoder-based classifier trained on different types of genomics data such as gene expression, DNA m…
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**Describe the bug**
Perfect matches to OXA-48 are no longer reporter in microSALT, instead microSALT reports OXA-566 resistance of lower %identities.
Message from KS in Ticket [722237](https://cl…
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Hello fellow team members!
My name is Bruno Grande. I'm a PhD candidate in Molecular Biology and Biochemistry working in cancer genomics at Simon Fraser University in the Vancouver area. If the na…
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The challenge at the bottom of this lesson is not rendering properly.
https://datacarpentry.org/wrangling-genomics/01-background/index.html
I also think perhaps this question, 'How many rows an…
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It'd be nice to write up some demos of how to visualize and explore large data sets; e.g. see
[shinyheatmap](http://www.rna-seqblog.com/shinyheatmap-ultra-fast-low-memory-heatmap-web-interface-for-…
ctb updated
11 months ago
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Hey,
Wanted to run this pipeline with comparable combinatorial barcoding snRNA-seq (Sci-RNA-Seq3) but realized an input file is missing.
Script: Section_1_processing.R - line 17:
"mouse_gene…
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Hello!
I have some seqFISH data from Spatial Genomics generated by their 'genePS' system. I was wondering if anyone had some code to import this data into a SpatialExperiment S4 R/Bioconductor clas…
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I'm using this script:
```
#!/bin/bash
# Parameters to replace:
# The GOOGLE_CLOUD_PROJECT is the project that contains your BigQuery dataset.
GOOGLE_CLOUD_PROJECT=psjh-eacri-data
INPUT_PATTER…
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## Background
RNA expression data associates genomic features that gives a perspective into the genetic activity within a cell medium. Experiments often relate sample and expression data to discover …