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### Describe the bug
From the screenshot you can see on the horizontal plane that there are parts of the brain that are being removed when registering the brain to MNI space. The steps before, has …
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@oesteban I noticed you're using 24.0.0. That doesn't include the fixes for fieldmaps from June. 24.1.0rc0 does.
Note, however, that there seems to be a bug in nitransforms, so I might put out a 24…
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Hi, I tried to apply BVeR on an MNI image and it always detects the whole image as mask independent of what parameters I'm setting. It is not clear what these parameters mean and how I should set them…
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In this line:
https://github.com/BIC-MNI/minc-tools/blob/master/progs/mincmath/mincmath.c#L689
the percent difference is calculated as:
100.0 * (value1 - value2) / value1;
should that not be:
…
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Hi
I keep getting a KeyError with the parcel_naming.py
``
python parcel_naming.py random_all.nii.gz random '10,20,30,40,50,60,70,80,90,100,110,120,130,140,150,160,170,180,190,200,210,220,230,240,25…
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I cannot open this page:
curl: (7) Failed to connect to vshg02.mni.thm.de port 80: Connection refused
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Are the samples with sampleSizeValues, or are then organismQuantities? With pollen, the counts are not organisms, with diatoms they are, with fossils, we get MNI. . . @tucotuco, any thoughts? @iceage…
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### What happened?
I'm using fMRIPrep to process HCP-YA data, which includes single band reference (SBRef) images. However, I've noticed that the SBRef images were not utilized during the motion co…
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Not sure if this is the right place to request, but, the releases here:
https://packages.bic.mni.mcgill.ca/minc-toolkit/MacOSX/
are all Intel-only for macOS.
Would it be possible to build a […
seanm updated
2 years ago
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Hi @bbuchsbaum ,
Thanks for your `neuroim2` package. Very helpful for handling **.nii** images!
I have some questions of using `neuroim2`:
1. Does `neuroim2` depend upon the original `neuroim…