BIC-MNI minc-tools issues

BIC-MNI / minc-tools

Basic minc-tools from former minc repository

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issues

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add test for mincresample with 4D float volume

#121 jiax1994 closed 11 months ago
1
avoid getting attributes for a dimension with no axis, like time axis

#120 jiax1994 closed 1 year ago
5
mincreshape modifies image-min when changing type

#119 bbbxyz opened 2 years ago
1
mnc2nii error - "floating point exception (core dumped)"

#118 KarissaChan1 opened 2 years ago
5
mnc2nii not populating fields dim_info and slice_code in the NIfTI file

#117 cmadjar opened 2 years ago
2
Use min-tools on Win10

#116 Leong1230 closed 2 years ago
1
Fix bug with mincreshape and spacing headers

#115 bbbxyz closed 1 year ago
1
'Floating point exception' error using mnc2nii

#114 Colm2021 closed 3 years ago
3
Make major modifications to dcm2mnc towards better support of a variety of datasets

#113 jpcoutu closed 1 year ago
8
Fix bounds in index of next slice

#112 bbbxyz closed 3 years ago
1
Undefined behaviour in mincresample

#111 bbbxyz closed 3 years ago
1
nii2mnc doesn't seem to handle scl_slope and scl_inter properly

#110 gdevenyi opened 3 years ago
0
mnc2nii - Floating point exception (core dumped) error

#109 cmadjar closed 3 years ago
4
Fix build error with GCC 10 due to missing …

#108 smr99 closed 3 years ago
5
can't be built outside of toolkit due to missing cmake-modules/FindNIFTI.cmake

#107 bcdarwin closed 4 years ago
2
Uniformize tmpdir handling in shell scripts

#106 gdevenyi closed 4 years ago
3
Tempdir handling by various MINC tools

#105 zijdenbos closed 4 years ago
1
mnc2nii requires no transformation input?

#104 ljc19800331 closed 4 years ago
3
dcm2mnc - phase encore direction information missing

#103 ileppe opened 4 years ago
0
Specify units for dimensions when generating nifti files

#102 gdevenyi closed 4 years ago
3
volume_stats: Assertion failed in CachedArray.cc AND seg fault in spline_smooth

#101 eds-slim closed 4 years ago
2
mnc2nii do not populate time_units header field in the NIfTI file

#100 cmadjar closed 4 years ago
5
mnc2nii label creates wrong affine matrix when direction_cosines is not specified

#99 stilley2 closed 4 years ago
13
mincstats does not honour order of command-line arguments

#98 gdevenyi opened 4 years ago
0
dcm2mnc issue with Philips Medical Systems Ingenia

#97 cmadjar opened 4 years ago
2
dcm2mnc issue with GE MEDICAL SYSTEMS DISCOVERY MR750w

#96 cmadjar opened 4 years ago
2
dcm2mnc issue with Siemens Prisma scanner (QSM and multi-echo fieldmap)

#95 cmadjar opened 4 years ago
0
dcm2mnc binary versions

#94 cmadjar closed 4 years ago
4
skip image if marked as invalid

#93 Abelian-grape opened 5 years ago
2
Add label handling to minclookup to prevent renormalization

#92 gdevenyi closed 5 years ago
3
minclookup does not support -labels

#91 gdevenyi closed 4 years ago
7
mn2nii failure to produce valid NIfTI files

#90 cmadjar closed 4 years ago
50
dcm2mnc not using private Philips dicom tags for scaling

#89 jpcoutu opened 5 years ago
1
dcm2mnc does not properly convert some PV6.0.1 dicoms

#88 egarza closed 5 years ago
1
mnc2nii gives incorrect output with -dual or -ASCII options

#87 stilley2 opened 5 years ago
0
Compilation issue

#86 moreje closed 4 years ago
8
add fclose to mincextract

#85 stilley2 closed 5 years ago
0
ACR_Trigger_time takes precedence over ACR_Frame_reference_time

#84 Abelian-grape closed 5 years ago
0
mincstats variance fix

#83 bbbxyz closed 5 years ago
0
Added max difference option and tests to minccmp

#82 bbbxyz closed 5 years ago
0
Created tests for mincmorph single ops

#81 bbbxyz closed 6 years ago
0
Changed mincmorph to be more permissive with dimension order

#80 bbbxyz closed 6 years ago
1
mincstats reports negative variance and -nan for stddev as a result

#79 gdevenyi closed 5 years ago
5
.nii support for minc tools

#78 andreashorn closed 6 years ago
14
sepearated the "mincextract ... | convert ..." command into 2 seperate &do_cmd to avoid piping errors

#77 thomasbeaudry opened 6 years ago
1
sepearated the "mincextract ... | convert ..." command into 2 seperate &do_cmd to avoid piping errors

#76 thomasbeaudry closed 6 years ago
1
Siemens mosaic diffusion scan upside down (and solution)

#75 jpcoutu opened 6 years ago
2
Add recursive dicom file collection through subfolders

#74 jpcoutu closed 6 years ago
0
add_philips_info temporal id determination

#73 jpcoutu opened 6 years ago
1
dcm2mnc assigns wrong Slice indices to 4D PET dicom series

#72 jpcoutu opened 6 years ago
4