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Here's a draft GitHub issue summary that could excite people about the "Gödel Golem" self-bootstrapping AI concept:
**Title: The Gödel Golem - A Novel Path Toward Self-Bootstrapping AGI**
Throughout…
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These are from SILVA, but seem to have no subtaxa, and may simply be RNA sequence clusters. Not sure if anything need to be done about this or not, to if it is symptomatic of a general SILVA issue
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Hi,
I am using vegan::fisher.alpha(). My test data is
```
> otu_table(GAGA_ampSeq.physeq.rarefy)[1:10,20:24]
OTU Table: [10 taxa and 5 samples]
taxa are rows
…
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### Description
Implement strategies (or an ensemble of strategies for cross-validation) to produce pairs of `sequences_{serotype}.fasta` and `metadata_{serotype}.tsv` files.
### Context
Follow…
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Dears
Hello
I want to use microeco package and then go through its tutorial dataset to check the functionality of all required packages including its possibility for microbial downstream analysis.…
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Lower respiratory tract microbiome composition and community interactions in smokers – Michael Campos et al. – Access Microbiology 2023
DOI: 10.1099/acmi.0.000497.v3
https://www.microbiologyresearch…
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### System details
RStudio Edition : Desktop
RStudio Version : 2023.09.0 Build 347
OS Version : Windows 11
R Version : 4.3.0
### Steps to reproduce the problem…
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**Bug Description**
When running `core-metrics` (and `core-metrics-phylogenetic`), the following error will be raised if a user's metadata file is missing sample IDs that are present in the feature t…
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Thanks for the great package! The speed-ups are awesome. This is a feature request: have you considered adding a function for mean phylogenetic distance (like in picante)? That would be nice, since it…
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## User story
>As a curator
>I want the post uploadscript to work as expected
>So that I can use it
## Acceptance criteria
>Given I have uploaded a dataset using the upload script
>Whe…