-
**From:** Mauricio Saenz
**Email:** mauricio.saenz-roldan@pasteur.fr
**Server IP:** 10.142.0.16
**Msg:** Hello,
I would like to use the datasets of scRNAseq to compare the expression of a group of…
-
Integration of single-cell transcriptomes and chromatin landscapes reveals regulatory programs driving pharyngeal organ development (https://www.nature.com/articles/s41467-022-28067-4)
The scRNA-se…
-
I frequently work with single-cell multi-omics data (mostly scRNA-seq + CITE-seq, but scATAC-seq is also expected), and it is known that different modalities for the same samples requires separate seq…
-
Project UUID: f81efc03-9f56-4354-aabb-6ce819c3d414
Project Title: Cell hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics
Project Short Name: Multip…
-
I hope you're doing well. I recently came across your paper, 'TRUST4: immune repertoire reconstruction from bulk and single-cell RNA-seq data,' published in Nature Methods. I was highly impressed by t…
-
Hello,
Recently, I'm reading the paper, **Single cell transcriptomics reveals spatial and temporal dynamics
of gene expression in the developing mouse spinal cord**. I have some naive problems.
1.…
hahia updated
4 years ago
-
Hi~Dr, thank you for your package.
I would like to ask, beluga model is pre-trained with hg19, while the scRNA-seq data is mapped to GRCh38 genome version, so is it effective and appropriate to use…
-
Hi, thanks for the great tool!
I ran Numbat (v1.2.1) on a 10x scRNA-seq dataset. The program outputs the CNV plots ("panel_2.png") without reporting any error. However, the probabilities of each CN…
hxj5 updated
2 months ago
-
Dear EcoTyper team,
Hi, all! Hope you been well and thanks so much for sharing amazing tool.
I was following tutorials using new TCGA data with in-house scRNA-seq dataset.
Initially, I run Tuto…
-
Thanks you for developing snapATAC tools,
and i have a question:
I followed the "Integrative Analysis of PBMC scATAC-seq and scRNA-seq" pipeline.
1. drawing the prediction score in histogram…