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Hello Igor,
I am currently extracting STR from 1000 Genome WGS and a WES dataset.
When comparing the distributions of the STRs used in the catalog between the two datasets, I can see some discrep…
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Cross-referencing to https://github.com/ga4gh/cloud-interop-testing/issues/111
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**Describe the bug**
`POST` /runs throws a `400` error.
Request:
```
curl \
-X POST \
"http://localhost:8090/ga4gh/wes/v1/runs" \
-H "accept: application/json" \
-H "Content-Type: mu…
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Hi,
I installed genome-seek through conda:
```
mamba create -c conda-forge -c bioconda -p /mycondaEnv/snakemake_singularity snakemake singularity
git clone https://github.com/OpenOmics/genome-…
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Gives `run_dragen_somatic_step` instead of `workflow.cwl#dragen-somatic-with-germline-pipeline--4.2.4/run_dragen_somatic_step`
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**Describe the bug**
Dear bamtocov team,
I have human WES data and am trying to run bamtocov. After 6 hours, not even half is done/calculated, even when using 24 threads. Maybe I am missing somet…
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Hi there,
We're developing a WES called Sapporo, which we're using as the backend for our web service. This service accepts requests from both authenticated and anonymous users to execute specific …
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**Describe the bug**
Amazon Genomics CLI has been shuttered and links in the docs to it are dead. I believe this is a documentation only ticket (no code specific to AGC is in the CLI).
.
**Describe the so…