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Not sure this is doable or not. What I would like to suggest is to have a 'manual mode segmentation' that can overrule 'predicted segmentation'. Currently, predicted segmentation is based on the patte…
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# Pitch
## Summary
NYC's Department of Health & Mental Hygiene makes regular updates to their data set on beach water quality. In particular, they test their samples for enterococci, AKA indicator…
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```kotlin
import com.fasterxml.jackson.annotation.JsonSubTypes
import com.fasterxml.jackson.annotation.JsonTypeInfo
import com.fasterxml.jackson.databind.annotation.NoClass
import com.fasterxml.ja…
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The "Explore by species" tab, and map interaction, including time controls, appear to be working except for
- Selecting a group, e.g. "Birds", then clicking the time control "play" repeatedly toggles…
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CREATE TYPE public.analysis_result_value_type AS ENUM
(
'vancomycin_resistant_bacteria',
'carbapenemase_producing_bacteria')
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Hello,
I came across this issue twice, whenever there's empty bin set in the refine module, the program exist. Any tips where I should look into?
An example of error message:
```
there are 27 …
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I want to investigate HGT among an eukaryote and two of its symbiont bacteria (all pairs:: EK-bacteria1, EK-bacteria2, bacteria1-bacteria2). Is it possible to use your pipeline for this purpose?
Th…
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Dear members,
I was trying to download the databses for Archaea, Bacteria and virus using the below code
centrifuge-download -o library -P 20 -m -a "Any" -d "archaea,bacteria,viral" refseq > seqid…
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You should include the expected output of the test run described in Readme.md in the repo.
`FCS_combo_test.4932.fcs_gx_report.txt`
`FCS_combo_test.4932.taxonomy.rpt`
and preferably the stdout+stder…
travc updated
3 hours ago
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Hi
I am running ampliseq for eukaryotic classification. I can see many unclassified data based on Barrnap.. (Barrnap classified 13 ( 0.42 %) ASVs as most similar to Bacteria, 16 ( 0.52 %) ASVs to Arc…