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Hi
Sorry, I found `inferHeterogeneity` function very helpful as I am working on clonality evolution in cancer; Plotting output of inferHeterogeneity gives separate results by sample, is it possible…
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- [x] Do we need the ASCN column? Maybe we can only show this when a study has different methods across samples.
**no change required - if we don't show it, we'll need to introduce the method somewher…
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Hi there,
I'm trying to carry out some clonality analysis, however when I execute cnaCCF_annot, I receive the following error:
Command: sa.vcf
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Hello
`inferHeterogeneity` function clusters VAF to infer clonality
Can we use Cancer Cell Fraction (CCF) instead of VAF to get something like
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29055897:
"Modern diagnostic pathology has exploited the mole…
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Hi everyone,
I have some issue, which is... confusing.
I used stringMLST before, succesfully with a cgMLST scheme, and the results seem to make sense.
For another project, I also ran some data wi…
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Hi,
I'm very new to mixcr and even to running pipelines for analysis.
anyway I'm trying my best to learn and I just got some fastq RNA-seq files and I want to extract TCR clonality informations.
I …