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Data viewers and apps/methods should be collapsible. One idea is to use the left-hand "gutter" in the narrative canvas for a small grey arrow. Another option would be to roll up the widget on a double…
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It'd be great to have a survey of metadata standards for the user that is using our package and is new to metadata.
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It would be great if users could implement an option in Snippy (something like "--dedup") that would mark read duplicates for removal via the newly available Samtools markdup (in Samtools Release 1.6)…
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Hello, I've sequenced one bacteria genome using HiSeq platform (2x150bp). Sequencing depths are good (almost 330-fold). I typed the commands like in the below, but some error reported and spades is no…
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Welcome to Applied Statistics for High-Throughput Biology at the University of Trento. Please use this "Issue" to introduce yourself, using your new Github account.
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Hi Ryan.
When running `java -version` on our system we get the following:
openjdk version "1.8.0_131"
OpenJDK Runtime Environment (build 1.8.0_131-b11)
OpenJDK 64-Bit Server VM (bu…
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## Link to Container Collection Log, Build, or Collection (in that order)
https://www.singularity-hub.org/collections/579
### Behavior when Building Locally
Works! Built it successfully on …
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{
"body": {
"sections": {
"section": [
{
"@id": "sec1",
"section-title": "Introduction",
"para": [
{
…
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breseq -r stLMTB11381.fasta -j 8 DNA-4_S4_L001_R1_001.fastq DNA-4_S4_L001_R2_001.fastq
================================================================================
breseq 0.27.1 revision 87c22…
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So far IntegronFinder accepts only single fasta file. It can be convenient to implement a search on a multiple fasta file.